PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU12016.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | DBB | ||||||||
Protein Properties | Length: 242aa MW: 27322.4 Da PI: 7.8466 | ||||||||
Description | DBB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 22.9 | 1.7e-07 | 35 | 72 | 5 | 37 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......H 37 C++++++ ++ +C+ ++ +lC +C + H H PHU12016.1 35 SCELCKSE-ASVYCQADNAFLCWKCDKWVHAAnflarrH 72 6******9.*******************99545555556 PP | |||||||
2 | zf-B_box | 22.9 | 1.7e-07 | 152 | 189 | 5 | 37 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......H 37 C++++++ ++ +C+ ++ +lC +C + H H PHU12016.1 152 SCELCKSE-ASVYCQADNAFLCWKCDKWVHAAnflarrH 189 6******9.*******************99545555556 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence |
MCRGSKEGEE ESPPISFCKG PLEEGQESTI VSTISCELCK SEASVYCQAD NAFLCWKCDK 60 WVHAANFLAR RHIRCLLCGV CRRLTRRFLI GASSEVDFLA SVGLVQRRSR RNEDCEVIVR 120 GSKEGEEESP PISFCKGPLE EGQESTIVST ISCELCKSEA SVYCQADNAF LCWKCDKWVH 180 AANFLARRHI RCLLCGVCRR LTRRFLIGAS SEVDFLASVG LVQRRSRRNE DCEVIVRCYV 240 RN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G15840.1 | 7e-11 | CO-like family protein |