PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU11681.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

HSF

Protein Properties

Length: 368aa MW: 42587.3 Da PI: 5.4081

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU11681.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	109.1	3.3e-34	69	160	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Flkk++e+++d++++++isws++++sfvv+d+++f+ ++Lpk+Fkh+nf+SF+RQLn+Y F+kv++++ weF+++ F+kgkk+ll +ik PHU11681.1 69 FLKKTFEMVDDPDTDSIISWSNTQTSFVVWDPHKFSIHLLPKHFKHNNFSSFIRQLNTYRFRKVDSDR---------WEFANEGFQKGKKNLLINIK 156 9**************************************************************999.........**************** PP XXXX CS HSF_DNA-bind 99 rkks 102 r+k+ PHU11681.1 157 RRKQ 160 97 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
MELETMGDQK TMVMDVKEKR QINGLLEVKE ELVLFLDEDD IIGSVAADGN FTSLPKPLEG 60 LRDVGPPPFL KKTFEMVDDP DTDSIISWSN TQTSFVVWDP HKFSIHLLPK HFKHNNFSSF 120 IRQLNTYRFR KVDSDRWEFA NEGFQKGKKN LLINIKRRKQ YSQQGGSAKS WLGSCKDGGT 180 DQAEIEKLKK DQNTLKMEIL RLKQQQESTD SYLATMKERL QNTETRQKYM VIFMAKIFKN 240 PLFVQHLVEK MKQGKTLDNG RFTKKRRLTN ATTDGDEKSL QFQEEYTTIK SEIQTLSSSD 300 DSSGPVEEQK AKGNNSPDIL PENYILWEKL MEDDMICENG EETDKYQSEI VHELEDLISK 360 PSELKCMP

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

MELETMGDQK TMVMDVKEKR QINGLLEVKE ELVLFLDEDD IIGSVAADGN FTSLPKPLEG  60
LRDVGPPPFL KKTFEMVDDP DTDSIISWSN TQTSFVVWDP HKFSIHLLPK HFKHNNFSSF  120
IRQLNTYRFR KVDSDRWEFA NEGFQKGKKN LLINIKRRKQ YSQQGGSAKS WLGSCKDGGT  180
DQAEIEKLKK DQNTLKMEIL RLKQQQESTD SYLATMKERL QNTETRQKYM VIFMAKIFKN  240
PLFVQHLVEK MKQGKTLDNG RFTKKRRLTN ATTDGDEKSL QFQEEYTTIK SEIQTLSSSD  300
DSSGPVEEQK AKGNNSPDIL PENYILWEKL MEDDMICENG EETDKYQSEI VHELEDLISK  360
PSELKCMP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	4e-82	HSF family protein