PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU08543.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | ERF | ||||||||
Protein Properties | Length: 212aa MW: 24141.2 Da PI: 8.0537 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.1 | 1.1e-18 | 50 | 100 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 y+GVr++ +++Wv+e+r+pse +kr++lg++ t+e+Aa+a++ a+++l+g+ PHU08543.1 50 IYRGVRRRN-NNKWVCELREPSE---QKRIWLGTYPTPEMAARAHDVAALALRGN 100 69****887.8*********976...5*************************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 212 aa Download sequence |
MTNNTSSCSS NFSSLSAAAA SNVEGMLLLA SSRPKKRAGR KKFRETRHPI YRGVRRRNNN 60 KWVCELREPS EQKRIWLGTY PTPEMAARAH DVAALALRGN LATLNFVDSS WRFPVPVSKD 120 PKDIRLAAVI AAQGCSQDPE LVGVNYMNHQ EVNPISQEVK YLEDNETLEM QDWREKMSEG 180 LLFSPTPRLD SYFSWDDVES DVEVSLWSYN IR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25470.1 | 1e-47 | ERF family protein |