PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU06798.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

G2-like

Protein Properties

Length: 427aa MW: 48959.8 Da PI: 7.5859

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU06798.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	65.1	1.2e-20	252	301	4	54
G2-like 4 lrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 +Wt+ LH++F+eav+ L G+ + Pk+ile+m+v+gLt+ +v+SHLQk R PHU06798.1 252 TEWTEALHAKFMEAVQLL-GEGRCYPKEILEVMNVPGLTRMQVASHLQKCR 301 58**************.9***************************98 PP
2	Myb_DNA-binding	32.2	2.6e-10	253	300	3	47
SS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqky 47 WT+ ++ ++ +av++lG g +k I + m+ g+t+ q+ s++qk PHU06798.1 253 EWTEALHAKFMEAVQLLGEGrcYPKEILEVMNvPGLTRMQVASHLQKC 300 6*********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 427 aa Download sequence
MAAPYYGMID EVHVVLVDDD KEFVNNMVDL LKSYDYKEDT PYWTKLLALL CTYCDSQDVI 60 DRAGSMIYNG KSRHIKWRHN TIRELLSSEI ITVDYVRSKD NVLIPLTKDP SRKGVKSSLK 120 GMDLRPRTSH HCVMVVGTAL DAMAMLSKGK QKIDVMILNI HSSNTLSFHL LARVVALDII 180 SLVVWDEQNE LVVKKAFDEG AYLCLKKPFD KDITKYIWQF VVGEKLKREK ARKGFENNKN 240 QMNKIVKRKN CTEWTEALHA KFMEAVQLLG EGRCYPKEIL EVMNVPGLTR MQVASHLQKC 300 RRNDWRSPKE RKSLHRPLGQ GSSSDFHESR SNGIVSSRNI RNEISNGYNL NVSMDNVTSY 360 SSNATMYDTY VGNVAINGLE EENPNVQQYI GEPNISNMNN PFQKLEPPSA SLHNEQDNDF 420 DQVYYDD

Sequence ? help Back to Top

Protein Sequence Length: 427 aa Download sequence

MAAPYYGMID EVHVVLVDDD KEFVNNMVDL LKSYDYKEDT PYWTKLLALL CTYCDSQDVI  60
DRAGSMIYNG KSRHIKWRHN TIRELLSSEI ITVDYVRSKD NVLIPLTKDP SRKGVKSSLK  120
GMDLRPRTSH HCVMVVGTAL DAMAMLSKGK QKIDVMILNI HSSNTLSFHL LARVVALDII  180
SLVVWDEQNE LVVKKAFDEG AYLCLKKPFD KDITKYIWQF VVGEKLKREK ARKGFENNKN  240
QMNKIVKRKN CTEWTEALHA KFMEAVQLLG EGRCYPKEIL EVMNVPGLTR MQVASHLQKC  300
RRNDWRSPKE RKSLHRPLGQ GSSSDFHESR SNGIVSSRNI RNEISNGYNL NVSMDNVTSY  360
SSNATMYDTY VGNVAINGLE EENPNVQQYI GEPNISNMNN PFQKLEPPSA SLHNEQDNDF  420
DQVYYDD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	1e-19	ARR-B family protein