PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU06739.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 206aa MW: 23563.4 Da PI: 10.5312 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 75.9 | 3.1e-24 | 25 | 77 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TT..SEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsst..gklyeyss 51 k+i++k rqvtf+kRr+g++KKA+ELS+LCd++v v+i+s++ g+l+e+s+ PHU06739.1 25 KKIQDKNCRQVTFCKRRKGLMKKANELSILCDVDVGVVIISNNgtGRLHEFSN 77 689**************************************972257***985 PP | |||||||
2 | K-box | 35.7 | 3.6e-13 | 110 | 179 | 27 | 96 |
K-box 27 eienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrk 96 e Lq++ R++ + + s+ +L +Le++L+++l +iRs+K++l+le+++ l ++ek lqee+k L++ PHU06739.1 110 IGELLQTTERQFEETNADGFSVTDLVHLENELQTALIQIRSTKTHLMLESVKGLHEQEKLLQEEKKLLKN 179 457899999*********************************************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 206 aa Download sequence |
MGTCGNIGLG LKKKKKMGRR KLEIKKIQDK NCRQVTFCKR RKGLMKKANE LSILCDVDVG 60 VVIISNNGTG RLHEFSNTNS VTGILQRYKS HIKEEKEISG EHSKYSSMKI GELLQTTERQ 120 FEETNADGFS VTDLVHLENE LQTALIQIRS TKTHLMLESV KGLHEQEKLL QEEKKLLKNN 180 RARMKKNRKV NGMSDLPPQR VTLNFL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65070.1 | 9e-30 | MIKC_MADS family protein |