PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU06516.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

G2-like

Protein Properties

Length: 472aa MW: 53546.5 Da PI: 9.135

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU06516.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	60.1	4.6e-19	148	198	4	55
G2-like 4 lrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 ++Wt+ LH +F++av+qL G+ + Pk+ile+m+v+ Lt+ +v+SHLQk R+ PHU06516.1 148 IEWTEYLHGKFMKAVRQL-GEGNCYPKNILEVMGVPNLTRMQVASHLQKCRT 198 68**************.9***************************997 PP
2	Myb_DNA-binding	29.4	1.9e-09	150	196	4	47
S-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqky 47 WT+ ++ ++ +av+qlG g +k I + mg ++t+ q+ s++qk PHU06516.1 150 WTEYLHGKFMKAVRQLGEGncYPKNILEVMGvPNLTRMQVASHLQKC 196 *****************999*********************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 472 aa Download sequence
MTASYYGMIE EVRVMLIDSD TTSATEMVDL LNCYEYKVIS DEHDELFAKK AWDNGAYLYI 60 KKPFDGGILK YLWQFVLREK MQREKVGEGP MHVEDIGNNI IHEAENDVGS NGKYKLKRKR 120 GRKNLIETNV GERQRTNVNK AVRQKVCIEW TEYLHGKFMK AVRQLGEGNC YPKNILEVMG 180 VPNLTRMQVA SHLQKCRTNN WRAPGERKSV PHSSGQGSSS DSQQPSFFKK IGTMPRLHTC 240 VSNLQRNPNQ VQRGPEFLLP TLSTSNILSR GESSIQKFYH PQFQVQPHHL TFGNSFNNPF 300 FPVQNNIGRG IQQYGPFFGM PGSQGLQGPI IGNINYMPNL DFNRGSHQAQ SIYSLDLNNM 360 TNHNLGPPSA TLSNEQDRGF DQVYFDDLAV LAATAVPEVK QMQTIPLRRN NERRNWYHPA 420 PPLVQKDPLN EHISYDEFRA TFTALAHSVA AENNHQPITP ANLGANAVVV RI

Sequence ? help Back to Top

Protein Sequence Length: 472 aa Download sequence

MTASYYGMIE EVRVMLIDSD TTSATEMVDL LNCYEYKVIS DEHDELFAKK AWDNGAYLYI  60
KKPFDGGILK YLWQFVLREK MQREKVGEGP MHVEDIGNNI IHEAENDVGS NGKYKLKRKR  120
GRKNLIETNV GERQRTNVNK AVRQKVCIEW TEYLHGKFMK AVRQLGEGNC YPKNILEVMG  180
VPNLTRMQVA SHLQKCRTNN WRAPGERKSV PHSSGQGSSS DSQQPSFFKK IGTMPRLHTC  240
VSNLQRNPNQ VQRGPEFLLP TLSTSNILSR GESSIQKFYH PQFQVQPHHL TFGNSFNNPF  300
FPVQNNIGRG IQQYGPFFGM PGSQGLQGPI IGNINYMPNL DFNRGSHQAQ SIYSLDLNNM  360
TNHNLGPPSA TLSNEQDRGF DQVYFDDLAV LAATAVPEVK QMQTIPLRRN NERRNWYHPA  420
PPLVQKDPLN EHISYDEFRA TFTALAHSVA AENNHQPITP ANLGANAVVV RI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	1e-14	ARR-B family protein