PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU03036.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

C2H2

Protein Properties

Length: 344aa MW: 39229.4 Da PI: 6.6022

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU03036.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.9	8e-05	179	198	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++Cp C k+F+r n++ H+ PHU03036.1 179 FSCPLCFKTFNRYNNMQMHM 198 89*****************9 PP
2	zf-C2H2	14.6	9.7e-05	263	285	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +Cgk F + + ++H +++ PHU03036.1 263 FMCRKCGKAFAVRGDWRTHEKNC 285 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
MSDPYTNYFH GWFNNLNPLY HSSSSSTPPF SSYNYFLPSS TNFQYFQSSP PPSPPLKEPL 60 PLLSLSPTRQ IHQDQDYSST MEVDNNNNNN NKENKEESFI SNFGDEDQDD ESVSVALQLG 120 LPNPSPQDVI SSISNTNKEQ EEELTVANIG YSSTTSSTLH KGQYWIPTPA QILIGPTQFS 180 CPLCFKTFNR YNNMQMHMWG HGSQYRKGPE SLRGTQPTAM LRLPCFCCAP GCRNNIDHPR 240 AKPLKDFRTL QTHYKRKHGI KPFMCRKCGK AFAVRGDWRT HEKNCGKLWY CTCGSDFKHK 300 RSLKDHIKAF GNGHEAYGID CLEEEDEPAS EIEQDHDHDH DPSN

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

MSDPYTNYFH GWFNNLNPLY HSSSSSTPPF SSYNYFLPSS TNFQYFQSSP PPSPPLKEPL  60
PLLSLSPTRQ IHQDQDYSST MEVDNNNNNN NKENKEESFI SNFGDEDQDD ESVSVALQLG  120
LPNPSPQDVI SSISNTNKEQ EEELTVANIG YSSTTSSTLH KGQYWIPTPA QILIGPTQFS  180
CPLCFKTFNR YNNMQMHMWG HGSQYRKGPE SLRGTQPTAM LRLPCFCCAP GCRNNIDHPR  240
AKPLKDFRTL QTHYKRKHGI KPFMCRKCGK AFAVRGDWRT HEKNCGKLWY CTCGSDFKHK  300
RSLKDHIKAF GNGHEAYGID CLEEEDEPAS EIEQDHDHDH DPSN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-131	C2H2 family protein