PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU01225.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MYB | ||||||||
Protein Properties | Length: 242aa MW: 27216.8 Da PI: 8.9124 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.7 | 1.1e-17 | 11 | 56 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W +eEdell ++v+++G ++W+ I + ++ gR++k+c++rw + PHU01225.1 11 KGPWKKEEDELLQKLVEEHGAKNWSIIGKSIP-GRSGKSCRLRWCNQ 56 79******************************.***********985 PP | |||||||
2 | Myb_DNA-binding | 49.4 | 1.1e-15 | 65 | 107 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T +Ed+++++a +++G++ W+tIar + gRt++++k++w++ PHU01225.1 65 PFTRDEDDKIIKARAEFGNK-WATIARLLT-GRTDNSIKNHWNST 107 89******************.********9.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence |
MKTVKELIRV KGPWKKEEDE LLQKLVEEHG AKNWSIIGKS IPGRSGKSCR LRWCNQLSPQ 60 VEHRPFTRDE DDKIIKARAE FGNKWATIAR LLTGRTDNSI KNHWNSTLKR KGLELSKDLA 120 FENPQPPLKR SLSTGSGTNS GTPSGSDLSS GFARPDISTS LSLSLPGFGS SEDSNTPIIQ 180 NCNFGPSSIE KQLFSPEFLR VVQDMIRKEV ESYMSQYEEE RVAMYTEAVK NNAINNIEIC 240 KD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G23290.1 | 4e-59 | MYB family protein |