PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT99769.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 168aa    MW: 19312.8 Da    PI: 6.2856
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT99769.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.34.4e-193485256
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                +y GVr ++ +g++++eIrd + ng  +r++lg+f+taeeAa  +++a+ +++g+
  PHT99769.1 34 HYIGVRKRP-WGKYASEIRDSTRNG--RRVWLGTFDTAEEAALTYDQAAFCMRGP 85
                799******.**********44465..**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
MDLKIQDHEE LISIKVEVES FSQDSIISKE LEKHYIGVRK RPWGKYASEI RDSTRNGRRV  60
WLGTFDTAEE AALTYDQAAF CMRGPSTCLN FSVEKVRESL TKMEFNNDFK DGLLLSPAAA  120
IKDRHKKRNS TSRKKKQVNI KEENVLIFED LGTDLLDELL SEYSSCSN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1122135KDRHKKRNSTSRKK
2124137KDRHKKRNSTSRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.19e-43ERF family protein