PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT99766.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 170aa    MW: 19615 Da    PI: 5.4423
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT99766.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.13.9e-174090255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                +y GVr ++ +g+++AeIrd + ng   r++lg+f+t ee a a+++a+ +++g
  PHT99766.1 40 QYIGVRKRP-WGKYAAEIRDSTRNG--IRVWLGTFDTTEEVALAYDQAAFSMRG 90
                799******.**********44465..*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    
MDSFRGENIS YEEIKIEDEE EIITFNNNIQ DQENKQKEKQ YIGVRKRPWG KYAAEIRDST  60
RNGIRVWLGT FDTTEEVALA YDQAAFSMRG PSTYLNFPVE RVHESLRVFK YTGQDGSTSI  120
TEVIKEKHKK RNSKGKKIIT STKEENNVLV LEDLGPDLLD ELLSKCSTSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.14e-42ERF family protein