PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT97431.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 289aa    MW: 31745.1 Da    PI: 6.5294
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT97431.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.22.7e-20155204255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                  y+GVr+++ +g+W+AeIrdp+    + +r++lg+f tae+Aa+a+++a+ +++g
  PHT97431.1 155 NYRGVRQRP-WGKWAAEIRDPR----KaARVWLGTFNTAEDAARAYDRAAIEFRG 204
                 59*******.**********94....36************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MHWLNKRFKQ DGTSSSLQNN QQQMPRRLTG DQEYSVMVSA LKNVINGDIP IDSNQGLNMF  60
SPFQYSTGMN VTSSPSTSMS TSFEQVLGVP AEQEPCQFCR IQGCLGCDIF GTTFGSSSSS  120
SAAAAATATT TIAPVADNKK KSASTSAIAK KKKKNYRGVR QRPWGKWAAE IRDPRKAARV  180
WLGTFNTAED AARAYDRAAI EFRGPRAKLN FSFADYTVET PEQQSTSSSS PQQLQEEPQQ  240
LLQQGNNNSD FGSEIWDQLM GDNEIQDWLT MMNFNGDSSD STGGNVHSV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1139154KKKSASTSAIAKKKKK
2149155AKKKKKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.15e-32ERF family protein