PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT59618.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 219aa    MW: 25187.3 Da    PI: 6.521
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT59618.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.52.8e-1757106255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  y+GVr++  r +Wv+eIr+p   +k+ r++lg+f t+e Aa+a++ a+++l+g
  PHT59618.1  57 LYRGVRRRN-RDKWVCEIREP---NKKSRIWLGTFSTPEIAARAHDVAALALRG 106
                 69****887.8*********9...347*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MDFEDDQTYS SSSSSSDHDV TVNKEKHFDF SSCSMNNNVQ FKRRAGRKKF KETRHPLYRG  60
VRRRNRDKWV CEIREPNKKS RIWLGTFSTP EIAARAHDVA ALALRGTKAS LNFPGSAWSL  120
PKAKSSSPRD IQIAALQVSK EVVKHTLELE EEPLCSHDQR PKDDQENSLM EFMDEEAMFN  180
MPVLIDSMAE GMLLTPPAMK RGFNWGDVEE DVEFTLWKD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25470.14e-47ERF family protein