PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT59291.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 262aa    MW: 30089.8 Da    PI: 10.4121
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT59291.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.15.3e-19195245155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 ++y+GV ++k +grW+AeIrd ++   ++r++lg+f+taeeAa a+++a  +++g
  PHT59291.1 195 KKYRGVGQRK-WGRWAAEIRDKRN---NTRHWLGTFDTAEEAAVAYDEASIEING 245
                 59*******9.**********533...4*********************999877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MSKFVSGISQ EFIKLTQGSM SVKEYSCEFT KLARYAPLMM VYSKFVLGVS NSVVKKCWTT  60
ILIRDMDLSR LMVHAHQNKK EKLKEKEREN KKARIAMASN DEHHQNVAVS KIERVEKSTK  120
KASKSSFVIP RVVRIYMTDN DATDSSSDEE EMLQGEMSQR PKKLWIKEIM IENGRTGVIS  180
KKKSKEKKLL QVNMKKYRGV GQRKWGRWAA EIRDKRNNTR HWLGTFDTAE EAAVAYDEAS  240
IEINGANGLT NILEPPPKKM NP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.15e-32ERF family protein