PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT59285.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | ERF | ||||||||
Protein Properties | Length: 258aa MW: 28912.9 Da PI: 10.3522 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63.1 | 5.8e-20 | 191 | 241 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++y+GVr++k +grW+AeIrd ++ ++r +lg+f+taeeAa a+++a+ +++g PHT59285.1 191 KKYRGVRQRK-WGRWAAEIRDKRN---NTRRWLGTFDTAEEAAVAYDEAAIEING 241 59*******9.**********543...4999********************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence |
MNAKEYSHTL TKLAKYAPSI VANNRNLQGI CKAGSDVCFG CGKLGYRVRE CPVVSHRGKD 60 LCQQGQSNVS SAPESRPTKQ GATSTATNAM ASNDEHHQNV AVEKPSKIER VEKSTKKAGK 120 SSVVMPRVVR IYMTDNDATD SSSDEEEMLH GDNSQRPKKL WIREIMIENG RTRVISKKKS 180 KEKKLLQVNM KKYRGVRQRK WGRWAAEIRD KRNNTRRWLG TFDTAEEAAV AYDEAAIEIN 240 GANALTNILE PPLKKINP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27950.1 | 7e-23 | ERF family protein |