PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT58436.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 235aa    MW: 26379 Da    PI: 5.0033
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT58436.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.41e-19136186255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+++AeIrdp +ng  +r++lg++ tae+Aa a+++a+ +++g
  PHT58436.1 136 HYRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTYETAEDAALAYDKAAFRMRG 186
                 7********.***********9987..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MFGNIDFEND YALLQSIKLQ LLEDWEWENP PATSSENYAS SYGRNNSMES NNNTLSNVFP  60
NEFDYTLSNV FPNEFDYTSD TTFASDFLND CIGHERQPSS VKSEPEIWNF SEYAAQPETR  120
AVVAPPPPEP VVNARHYRGV RQRPWGKFAA EIRDPAKNGA RVWLGTYETA EDAALAYDKA  180
AFRMRGSRAL LNFPLRINSG EPEPVRVGSK KSSTSPECSS SSSSSSGKRR KKIPV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47220.12e-42ERF family protein