PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT58224.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 297aa    MW: 32537.2 Da    PI: 8.2839
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT58224.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.81.5e-19210261155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                 ++y+GVr+++ +g+++AeIrdp   + +  r++lg+f ta eAaka+++a+  ++g
  PHT58224.1 210 THYRGVRQRP-WGKYAAEIRDP---NrRGSRVWLGTFVTAIEAAKAYDKAAFTMRG 261
                 68********.**********9...4334*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MEYVDEIFAL EKIRNHLLGE FSPKTLKFGA GLTSGKCSYS ATDSTYGGSF NTLNCPLNYS  60
YSAINSGQCE SFSSLNCPTV MESSYSESAS SDSLPFDFFA DFEADFFQFG TNSSPESAKA  120
VHNQTNFSKL ESEPSISSSD YEFESKPQVI IDLTSPKSSS ASDRKPKLKI DLPSVKNFDM  180
INFGNSINST QSNPIVSVAV QQPRKTEGKT HYRGVRQRPW GKYAAEIRDP NRRGSRVWLG  240
TFVTAIEAAK AYDKAAFTMR GSKAILNFPL EVAKGATVSA AVNGGVKRRR ESEGDRG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47230.14e-32ERF family protein