PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT57926.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

TCP

Protein Properties

Length: 344aa MW: 37357.7 Da PI: 6.5849

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT57926.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	93.6	4e-29	63	157	15	104
TCP 15 vggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.......eaesssssas....nsssgkaaksaakskksqk 102 v+gR+RR+R++a+caar+F+L++eLG+++d++t+ WLl+ a++ai+e+tgt++ +a ++ + n++++ +++++k++++++ PHT57926.1 63 VEGRGRRIRIPATCAARIFQLTRELGHKSDGETVRWLLEHAEEAIIEATGTGTVPAIAVsvngtlkIPT------TapvrNDNEDIDENDTHKRRRKST 155 79*************************************************888884443222222111......111112222222222221111111 PP TCP 103 sa 104 ++ PHT57926.1 156 NS 157 11 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
MSNYHDPDDD CGNSELSNCT AVEQNDRKMD NNEIYHGKQV VLSSLKEESF DTHQLAPAMP 60 ITVEGRGRRI RIPATCAARI FQLTRELGHK SDGETVRWLL EHAEEAIIEA TGTGTVPAIA 120 VSVNGTLKIP TTAPVRNDNE DIDENDTHKR RRKSTNSEFV NAANVSQFAP ATTAATAINC 180 PPHGHGLVPV WAMSNGGIMV PSNAIWMVPA ISHNNNNNIN NSSILQYPQL WAITPSVTPV 240 FNLATRPISP FVAASATNIN GSPPVMMAGP LTTTGPKVGS NKSSMAPASL SSSSSIDRNN 300 NENNDVKPHM LRDFSLEIYD RKELQFKNRS GSHQQEAQVT SSKP

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

MSNYHDPDDD CGNSELSNCT AVEQNDRKMD NNEIYHGKQV VLSSLKEESF DTHQLAPAMP  60
ITVEGRGRRI RIPATCAARI FQLTRELGHK SDGETVRWLL EHAEEAIIEA TGTGTVPAIA  120
VSVNGTLKIP TTAPVRNDNE DIDENDTHKR RRKSTNSEFV NAANVSQFAP ATTAATAINC  180
PPHGHGLVPV WAMSNGGIMV PSNAIWMVPA ISHNNNNNIN NSSILQYPQL WAITPSVTPV  240
FNLATRPISP FVAASATNIN GSPPVMMAGP LTTTGPKVGS NKSSMAPASL SSSSSIDRNN  300
NENNDVKPHM LRDFSLEIYD RKELQFKNRS GSHQQEAQVT SSKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51910.2	3e-44	TCP family protein