PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT57823.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Nin-like

Protein Properties

Length: 1002aa MW: 110231 Da PI: 5.9261

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT57823.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	92.4	3.2e-29	602	653	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+isle+l++yF++++kdAAk+Lgvc+T++KriCRq+GI+RWP+Rki+++ PHT57823.1 602 AEKTISLEVLQQYFAGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKINKV 653 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1002 aa Download sequence
MNLIFRPPPP PPPPTGQHQP PHNQRESSES LMMMDLDLDL DSAWSFDQIF AAAAASNPMF 60 AAAEQPSSPL WAFSDENEDK PTNTNGNAIA GAGVGSLRLS SYPRFLTTYI SEHEAAPETV 120 SVTDDKKRIP PPNMGLNPLD YQDGSCIIKE RMTQALRNFK ESTGERVLAQ VWAPVKNGSR 180 YVLTTSGQPF VLDPDCNGLH QYRMVSLMYM FSVDGETDGV LGLPGRVYRK KLPEWTPNVQ 240 YYSSKEFPRL NHALHYNVRG TLALPVFEPS GQSCVGVLEL IMTSQKINYA PEVDKVCKAL 300 EAVNLKSSEI SDYPNHQICN EGRQNALVEI LEILTAVCET YKLPLAQTWV PCRHRSVLAD 360 GGGFKKSCSS FDGSCMGQVC MSTTDVAFYV VDAHMWGFRE ACAEHHLQKG QGVAGRAYAS 420 QKSCFCEDIG QFCKTEYPLV HYARLFGLSR CFAICLRSTH TGNDDYILEF FLPPNDGDYT 480 DQFALLNSLL LTMKQHFRSL RVASGEELEH DWGSVEIIKA SAEEKLGSRF ESVPTTKSLP 540 QPASVANGRT RPDLMEEQQS PVALNGAKGA EGVNGTAEAH NHTSFSENKP TGKKSERKRG 600 KAEKTISLEV LQQYFAGSLK DAAKSLGVCP TTMKRICRQH GISRWPSRKI NKVNRSLSKL 660 KRVIESVQGA DGTFSLTSLA PNSLPVAVGS ISWPAGMTDS PCKASEYHEE KNEFSNHGTP 720 ASYEEAEPSN QMLGSRIIGN EELSPKQNGF VREGSHRSRT GSFSREESTG TPTSHGSCQG 780 SPCAANESSP QNELVSSPTQ ESAMKVEGSL EPARQATGET NLSTAFLMPG LYIPEHNQQS 840 FKGMLVEDAG SSHDLRNLCP AGDVMFDERV PEYSWTNPPC SNGSAKDQVP LPAEKMPQFS 900 TRPEVTSVTI KATYREDIIR FRLCLSSGIF KLKEEVAKRL KLEVGTFDIK YLDDDHEWVL 960 IACDADLQEC VDISRSSGSN VVRLLVHDIM PNLGSSCESS GE

Sequence ? help Back to Top

Protein Sequence Length: 1002 aa Download sequence

MNLIFRPPPP PPPPTGQHQP PHNQRESSES LMMMDLDLDL DSAWSFDQIF AAAAASNPMF  60
AAAEQPSSPL WAFSDENEDK PTNTNGNAIA GAGVGSLRLS SYPRFLTTYI SEHEAAPETV  120
SVTDDKKRIP PPNMGLNPLD YQDGSCIIKE RMTQALRNFK ESTGERVLAQ VWAPVKNGSR  180
YVLTTSGQPF VLDPDCNGLH QYRMVSLMYM FSVDGETDGV LGLPGRVYRK KLPEWTPNVQ  240
YYSSKEFPRL NHALHYNVRG TLALPVFEPS GQSCVGVLEL IMTSQKINYA PEVDKVCKAL  300
EAVNLKSSEI SDYPNHQICN EGRQNALVEI LEILTAVCET YKLPLAQTWV PCRHRSVLAD  360
GGGFKKSCSS FDGSCMGQVC MSTTDVAFYV VDAHMWGFRE ACAEHHLQKG QGVAGRAYAS  420
QKSCFCEDIG QFCKTEYPLV HYARLFGLSR CFAICLRSTH TGNDDYILEF FLPPNDGDYT  480
DQFALLNSLL LTMKQHFRSL RVASGEELEH DWGSVEIIKA SAEEKLGSRF ESVPTTKSLP  540
QPASVANGRT RPDLMEEQQS PVALNGAKGA EGVNGTAEAH NHTSFSENKP TGKKSERKRG  600
KAEKTISLEV LQQYFAGSLK DAAKSLGVCP TTMKRICRQH GISRWPSRKI NKVNRSLSKL  660
KRVIESVQGA DGTFSLTSLA PNSLPVAVGS ISWPAGMTDS PCKASEYHEE KNEFSNHGTP  720
ASYEEAEPSN QMLGSRIIGN EELSPKQNGF VREGSHRSRT GSFSREESTG TPTSHGSCQG  780
SPCAANESSP QNELVSSPTQ ESAMKVEGSL EPARQATGET NLSTAFLMPG LYIPEHNQQS  840
FKGMLVEDAG SSHDLRNLCP AGDVMFDERV PEYSWTNPPC SNGSAKDQVP LPAEKMPQFS  900
TRPEVTSVTI KATYREDIIR FRLCLSSGIF KLKEEVAKRL KLEVGTFDIK YLDDDHEWVL  960
IACDADLQEC VDISRSSGSN VVRLLVHDIM PNLGSSCESS GE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	0.0	Nin-like family protein