PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT55243.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | Dof | ||||||||
Protein Properties | Length: 192aa MW: 20858.3 Da PI: 8.8032 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 126.2 | 9.8e-40 | 26 | 86 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++++l+cprCdstntkfCyynny+lsqPr+fCk+CrryWt+GG+lr++P+Ggg+rkn k+s PHT55243.1 26 PDQQLPCPRCDSTNTKFCYYNNYNLSQPRHFCKSCRRYWTHGGTLRDIPIGGGSRKNAKRS 86 7899*****************************************************9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 192 aa Download sequence |
MTLEASEKRV TTQQTAGGVL PPAQEPDQQL PCPRCDSTNT KFCYYNNYNL SQPRHFCKSC 60 RRYWTHGGTL RDIPIGGGSR KNAKRSRIYT STPFSSSTAV SPHGNSPFLV PLPTANQLLF 120 GSDVKPCLNM SGNNFTSLLS SHGPTGVLSL GGIEDVSFSI GRAAVWPFPG APDSYIRNYD 180 SDVGASMWQF SG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50410.1 | 2e-43 | Dof family protein |