PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT54436.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 386aa    MW: 44099.9 Da    PI: 4.9726
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT54436.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2569.9e-18250300255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y GVr ++ +g+++AeIrd + ng   r++lg+f t eeAa a+++a++ ++g
  PHT54436.1 250 HYIGVRKRP-WGKYAAEIRDSTRNG--IRVWLGTFNTDEEAALAYDQAALTMRG 300
                 799******.**********44465..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 386 aa     Download sequence    
MEFPSPQIQY PNFSFFQDQL PLSWNDQLFL DEHFSNYPWK VDSVDQSDNH HLPRSSSFFD  60
TNFSKGCYEW KVDSVDQSDD RQLPRSSSFP ETNSSKGCYA WKVDSVDQRD DHQLLRSSSF  120
SDTNSSKENY PLQIIDSSNQ EYDDCQLPSS STFSNTNSSK GCYAWKVDSV DQSDDHQLPR  180
SFSFSDTNSS KGNYPLQTID SSNQEDDDHQ LRRSSSFSDT NSSKGSNNHD IEEVTSSHDS  240
NPTRSNEKKH YIGVRKRPWG KYAAEIRDST RNGIRVWLGT FNTDEEAALA YDQAALTMRG  300
PLALLNFPIN KVRESLENIK YFCEDGISPA AVLKATNKMR CVKHRRNRKK GIKENNNNNN  360
NNNISNVLVF EDLGVELLDE LLMSSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.13e-39ERF family protein