PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT53930.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MYB | ||||||||
Protein Properties | Length: 336aa MW: 38433.6 Da PI: 6.1343 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.1 | 6.2e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l ++++ +G g+W+++++ g+ R++k+c++rw +yl PHT53930.1 14 KGLWSPEEDEKLSNYITNFGIGSWSSVPKQAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 44.9 | 2.6e-14 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg ++++E+++++ +++ lG++ W+ Ia+ ++ gRt++++k++w++ PHT53930.1 67 RGMFSQDEEDRILGLHQVLGNR-WAQIAAQLP-GRTDNEIKNYWNS 110 788*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 336 aa Download sequence |
MGRHSCGVKQ KLRKGLWSPE EDEKLSNYIT NFGIGSWSSV PKQAGLQRCG KSCRLRWINY 60 LRPDLKRGMF SQDEEDRILG LHQVLGNRWA QIAAQLPGRT DNEIKNYWNS SLKKKLMKQG 120 IDPNTHKPLR ENQVIKDEEN CTNKTSMFEV PFLNEMDQPF TQLASSKDQY VSKQVFDLLF 180 SHEFQSNENN SQTLAQYHDH HHQSEYEENP NYVFCSASSV TKLEHGQMTD TDFASSSTSR 240 MSSSNSSNMC SNQNTAGIRI NAMSENSEAL SWDVENKMES LFQYPYIGIK NEELRSSPSQ 300 ERELHGHSSG DFMSNYPLSS LTEELSGANL DVFQQI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G01680.3 | 9e-76 | MYB family protein |