PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT53085.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 191aa    MW: 21208.9 Da    PI: 5.3715
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT53085.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.82.3e-172271155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                s y+GV ++  +g+Wv+e+r+p   +k+ r++lg+f tae+Aa+a++ a+++l+g
  PHT53085.1 22 SVYRGVKRN--SGKWVCEVREP---NKKSRIWLGTFPTAEMAARAHDVAALALRG 71
                78****754..6******9998...347*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    
MLASNNPKKP AGRKKFRETR HSVYRGVKRN SGKWVCEVRE PNKKSRIWLG TFPTAEMAAR  60
AHDVAALALR GRSACLNFAD STWRLPIPAS SNSKDIQKEA AEAVEAFRPS ESEGVSGESA  120
DSSSPQTPES VFFMNEEVPE SMFFMDEEAL FFMPGLLANM AEGLTLPPPQ CGEFGDHVEV  180
DSYMPLWNYS V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25470.15e-61ERF family protein