PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PHT52156.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 253aa MW: 28875.6 Da PI: 9.7893 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 41.5 | 2.4e-13 | 150 | 195 | 4 | 54 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h + ErrRR+++N+ f+ Lr+llP +K +Ka++L +++YI+ L PHT52156.1 150 HHMISERRRREKLNENFQHLRSLLPLG-----TKKDKASVLASTTDYISCL 195 68899********************97.....7***************988 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 253 aa Download sequence |
MNNLFPNDFS NQTPTTTTTT TTRKAIILPI DQNLHSSSSS SSEYSPLYLN EIQKLTQFPK 60 IEGEDDALRQ AYLAVLSSSS SPSPSLSRGQ ITDKLTRMSS AFTKFRPDNY VSTSCKHHNN 120 NILKRYMTFF NNLYTINRQE GVRATTTQVH HMISERRRRE KLNENFQHLR SLLPLGTKKD 180 KASVLASTTD YISCLKDQVK ELCKRNEILE AQLLNKKEAF QFQQNESGKV AVYITNVEER 240 IVDLQVIARG KCS |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 155 | 160 | ERRRRE |
2 | 156 | 161 | RRRREK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G56960.1 | 5e-23 | bHLH family protein |