PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT50748.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 358aa    MW: 39397.9 Da    PI: 5.3858
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT50748.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.54.6e-20180229255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+  l+g
  PHT50748.1 180 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEEAALAYDKAAYMLRG 229
                 59******9.**********965...5**********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    
MAAAMDFWNS TVPLDLPLSS DPVTSGGELM EALEPFMKSV SPPSTSPVNF PPIFSSPSSD  60
LQSFPSFPPP NPISYPYTSS FYPTVQPSDD CSTSTEMNSQ IFSTGFSSYG MDQQSSSIGL  120
NQLTPTQIEQ IQAQINFQIQ QQQQQQMMSY HHHASSTMNF LAPKPVHMKQ SGSPPKPTKL  180
YRGVRQRHWG KWVAEIRLPK NRTRLWLGTF DTAEEAALAY DKAAYMLRGD FARLNFSHLR  240
HNFGEYNPLH SSVDAKLKDI CQSLAQGKSI DSKKKKTKGS ASASASAATA TGVVKMEEGE  300
SKVVEGGSES DGSGSASGES SPVTELIFPE FTEEESTWNM SENFLLQKYP SEIDWASI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78080.14e-48ERF family protein