PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT50621.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

ERF

Protein Properties

Length: 869aa MW: 98801 Da PI: 4.5301

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT50621.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	50.3	6e-16	735	778	1	48
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaia 48 ++y+GVr+++ +gr++AeIr p++ ++r++lg+++taeeAa a++ PHT50621.1 735 TKYHGVRRRP-WGRYAAEIRNPNT---KQRHWLGTYDTAEEAAFAYDI 778 69******.******933...5****************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 869 aa Download sequence
MMAEDLGVEA KEASVREVAK LLPLPELLQS ISSIKADYIA RQQANDAQLS TMVAEQVEQA 60 QAGLQSLSSS QKTINLLREN FLSIEKLCQE CQTLIENHDQ IKILSNTRNN LNTTLKDVEG 120 MMSISVEASE ARDSLRDDKE LINTYERLTA LDGKRRFALA AAGSHKEEVG RLREYFEDVD 180 RTWETFEKTL WAQIANFSKL AKESPQTLVR AIRVVEMQEI LDQQLAEEAA EAEGGGAMAS 240 IANPRRNAKK TTSSKNLTQQ KLKVQGKGYK DKCYESIRKS VEARFDKLLN EEELKTAIEE 300 ARVIGEELGE IYDYVAPCFP PRYEVFQLMV NLYTERFVQW LRKLSDQAGH MTNIEILKVT 360 GWVVDYQESL IGLGVDDSLA QVCSESGAMD PLMNAYVERM EATTKKWYTN ILEADKVQPP 420 KKTDDGKLYT PAAVDLFRIL GEQVQIVREN STDVMLYRIA LSLIQVMIDF QAAERKRLEE 480 PASEIGLESL CAMINNNLRC YDLAMELSSS TLEALPQNYA EQVNFEDTCK GFLEVAKEAV 540 HQTVSVIFED PGVEELLVKL YQKDWLEGQV TEFLVATFGD YFTDVKMYIE ERSFRRFVEA 600 CLEETIVVYV DHLLTQKNYI KEETIERMRL DEEVLMDFFR EYISISKVEN RVRILSDLRE 660 LASSESPDSF TLVYTNILEQ QPDCPPEVVE KIVSLREGIP RKDAKEVVQE CREIYEHSLV 720 DGNPPKTGRS SRHSTKYHGV RRRPWGRYAA EIRNPNTKQR HWLGTYDTAE EAAFAYDISS 780 IAFCGIENAR TNFVYPFPSF PSLYNSPAPP SPPPLSPPPP PPSTPELEVF ENNCMEIEMI 840 DNAGDDESLL IASILQSFCH TNTLDKLAL

Sequence ? help Back to Top

Protein Sequence Length: 869 aa Download sequence

MMAEDLGVEA KEASVREVAK LLPLPELLQS ISSIKADYIA RQQANDAQLS TMVAEQVEQA  60
QAGLQSLSSS QKTINLLREN FLSIEKLCQE CQTLIENHDQ IKILSNTRNN LNTTLKDVEG  120
MMSISVEASE ARDSLRDDKE LINTYERLTA LDGKRRFALA AAGSHKEEVG RLREYFEDVD  180
RTWETFEKTL WAQIANFSKL AKESPQTLVR AIRVVEMQEI LDQQLAEEAA EAEGGGAMAS  240
IANPRRNAKK TTSSKNLTQQ KLKVQGKGYK DKCYESIRKS VEARFDKLLN EEELKTAIEE  300
ARVIGEELGE IYDYVAPCFP PRYEVFQLMV NLYTERFVQW LRKLSDQAGH MTNIEILKVT  360
GWVVDYQESL IGLGVDDSLA QVCSESGAMD PLMNAYVERM EATTKKWYTN ILEADKVQPP  420
KKTDDGKLYT PAAVDLFRIL GEQVQIVREN STDVMLYRIA LSLIQVMIDF QAAERKRLEE  480
PASEIGLESL CAMINNNLRC YDLAMELSSS TLEALPQNYA EQVNFEDTCK GFLEVAKEAV  540
HQTVSVIFED PGVEELLVKL YQKDWLEGQV TEFLVATFGD YFTDVKMYIE ERSFRRFVEA  600
CLEETIVVYV DHLLTQKNYI KEETIERMRL DEEVLMDFFR EYISISKVEN RVRILSDLRE  660
LASSESPDSF TLVYTNILEQ QPDCPPEVVE KIVSLREGIP RKDAKEVVQE CREIYEHSLV  720
DGNPPKTGRS SRHSTKYHGV RRRPWGRYAA EIRNPNTKQR HWLGTYDTAE EAAFAYDISS  780
IAFCGIENAR TNFVYPFPSF PSLYNSPAPP SPPPLSPPPP PPSTPELEVF ENNCMEIEMI  840
DNAGDDESLL IASILQSFCH TNTLDKLAL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G24590.1	9e-24	ERF family protein