PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT47349.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family LFY
Protein Properties Length: 424aa    MW: 46827.5 Da    PI: 6.3039
Description LFY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT47349.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FLO_LFY6351.1e-19314041386
     FLO_LFY   1 mdpeafsaslfkwdpraaaaapparlleeaavse...ap........leaaaaaaarklreleelfkayGvryltvakiaelGftvstLvdmkdeeldd 88 
                 mdpeafsaslfkwdpr a+ +pp+rll   a+++   +p        + +  ++++r+l +leelf+ayG+ry+t+akiaelGftv+tL+dmkdeeldd
  PHT47349.1   1 MDPEAFSASLFKWDPRGAM-PPPSRLLDPVAAPPllpPPppplstapAYSIRSSTTRDLGGLEELFQAYGIRYYTAAKIAELGFTVNTLLDMKDEELDD 98 
                 9**************9887.5666666555554422211345443222233333334455*************************************** PP

     FLO_LFY  89 lmkslseifrldllvGeryGikaavraerrrleeeeaekkrrkllsedeetaldalsqeglseepvqe.ekeaagsggeglgeaelvaaeekkseeekk 186
                 +m+sls+ifr++llvGeryGikaa+rae rrleeee +++r ++ls+  +++ldalsqeglseepvq+ e+eaagsg  ++ +a++ +   + +++++k
  PHT47349.1  99 MMNSLSQIFRWELLVGERYGIKAAIRAEWRRLEEEE-ARRRGHILSDGGTNVLDALSQEGLSEEPVQQhEREAAGSGTWEVVAASAGGGG-RLKQRRRK 195
                 **********************************88.88888999999999***************996777899988886666665555.44445555 PP

     FLO_LFY 187 kaskkkqkrkkkkelkseededeeeeededeeg.........sgedgeerqrehPfivtepgevargkknGLDYLfdLyeqCrefLlqvqkiakerGek 276
                 ka+++ +  ++++ ++ e+d+++ee  d+dee+         +g + +erqrehPfivtepgevargkknGLDYLf+LyeqCrefL+qvq+iakerGek
  PHT47349.1 196 KAATAGATGRERRGMSGEDDDETEEFGDDDEENineaggcggGGGGTSERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLIQVQNIAKERGEK 294
                 554554444444454555555555555555554556666654444455*************************************************** PP

     FLO_LFY 277 cPtkvtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarqgwdidavfnahprLsiWYvPtkLr 375
                 cPtkvtnqvfryakk+gasyinkPkmrhYvhCYalhcLde+asnalrrafkergenvGawrqacykplvaiaa+qgwdid++fnahprL+iWYvPtkLr
  PHT47349.1 295 CPTKVTNQVFRYAKKSGASYINKPKMRHYVHCYALHCLDEDASNALRRAFKERGENVGAWRQACYKPLVAIAAQQGWDIDSIFNAHPRLAIWYVPTKLR 393
                 *************************************************************************************************** PP

     FLO_LFY 376 qLChlerskas 386
                 qLCh ers+a+
  PHT47349.1 394 QLCHSERSNAA 404
                 ********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 424 aa     Download sequence    
MDPEAFSASL FKWDPRGAMP PPSRLLDPVA APPLLPPPPP PLSTAPAYSI RSSTTRDLGG  60
LEELFQAYGI RYYTAAKIAE LGFTVNTLLD MKDEELDDMM NSLSQIFRWE LLVGERYGIK  120
AAIRAEWRRL EEEEARRRGH ILSDGGTNVL DALSQEGLSE EPVQQHEREA AGSGTWEVVA  180
ASAGGGGRLK QRRRKKAATA GATGRERRGM SGEDDDETEE FGDDDEENIN EAGGCGGGGG  240
GTSERQREHP FIVTEPGEVA RGKKNGLDYL FHLYEQCREF LIQVQNIAKE RGEKCPTKVT  300
NQVFRYAKKS GASYINKPKM RHYVHCYALH CLDEDASNAL RRAFKERGEN VGAWRQACYK  360
PLVAIAAQQG WDIDSIFNAH PRLAIWYVPT KLRQLCHSER SNAAAVGSSS VSGGGVVADH  420
LPHF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61850.11e-108LFY family protein