PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT46818.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

C2H2

Protein Properties

Length: 331aa MW: 35952.5 Da PI: 7.0195

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT46818.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.1	0.0012	138	160	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+++F++ L H +H PHT46818.1 138 YECKTCNRTFPSFQALGGHRTSH 160 99*********999998888777 PP
2	zf-C2H2	13.6	0.0002	222	244	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg Fs+ L H+r+H PHT46818.1 222 HECSICGAEFSSGQALGGHMRRH 244 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 331 aa Download sequence
MEFSEDSIDR TLVFKGKRSK RPRQFMAVAM VTSTSSTACD GGAGGGASGS NGGSDDVGRG 60 GHEIYSSSPT TSTTQISTSS TSEEDEDMAN CLILLAQSGR CEKLQVETTE RKMVKISSRK 120 FAEMATTTTG SKAGFYVYEC KTCNRTFPSF QALGGHRTSH KKIKTITEDK KSTADSNSQL 180 QQGHHHQQHE EKSSRIITPS VNYSTGNSNS VANLINIKPK IHECSICGAE FSSGQALGGH 240 MRRHRPPTIT TTATNTKNIT VDEISNTSDN SSHNDDENSK ENKPKIFLSL DLNLPASPED 300 HDHQRDAANF EFSANQQNLV FSAAALVDCH Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04390.1	1e-45	C2H2 family protein