PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT40957.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family HD-ZIP
Protein Properties Length: 243aa    MW: 27674.8 Da    PI: 5.0693
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT40957.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox59.64.9e-194394556
                SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox  5 ttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                ++ft+eq++ Le+ Fe + ++  +++ +LA++lgL+ rqV +WFqN+Ra++k
  PHT40957.1 43 RRFTDEQIKSLETIFETETKLEPRKKLQLARELGLQPRQVAIWFQNKRARWK 94
                48*************************************************9 PP
2HD-ZIP_I/II124.26.1e-4042132393
  HD-ZIP_I/II   3 krrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                   rr+++eq+k+LE+ Fe+e+kLep++K +lareLglqprqva+WFqn+RAR+k+kqlE+dy+ Lk++yd+l+++ e+L+ke+++L  +l++
   PHT40957.1  42 ARRFTDEQIKSLETIFETETKLEPRKKLQLARELGLQPRQVAIWFQNKRARWKSKQLERDYSILKSNYDNLASQYESLKKEKQSLLIQLQK 132
                  69***********************************************************************************999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MFDVGEFSPT SSAALSAECF SSSSCFSNPS SSKKKKINSN NARRFTDEQI KSLETIFETE  60
TKLEPRKKLQ LARELGLQPR QVAIWFQNKR ARWKSKQLER DYSILKSNYD NLASQYESLK  120
KEKQSLLIQL QKLNDVMKKD SIGLESDKRA DAIKKNIEMD GRPSLSFDLS EHGANGVISD  180
DDSCIKPNYL GLNEDTDHHL LKMVEAGDSS LTSPENWGSL DEDGLLDQQP SSTTYDQWWD  240
FWS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61890.17e-63HD-ZIP family protein