PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT40878.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bZIP

Protein Properties

Length: 424aa MW: 45252.1 Da PI: 6.5943

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT40878.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	70.2	3.1e-22	281	343	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkre+rkq+NRe+ArrsR+RK+ae eeL+ +v++L+aeN++Lk+e+++l ++++klk ++ PHT40878.1 281 ERELKREKRKQSNRESARRSRLRKQAEAEELAVRVQSLTAENMTLKSEINKLIENSEKLKLDN 343 89**********************************************************887 PP

Sequence ? help Back to Top
Protein Sequence Length: 424 aa Download sequence
MGNSEDGKSC KLEKPSSPTP DQSNLHVYPD WAAMQAYYGP RVAVPAYFNS AVAPGHTPHP 60 YMWGPQPMIP PYGTPYAALY AHGGVYAHPG VPIGSHPPPS HGMATSPAVS QAMDGASLSL 120 DASAKSSGNS ERGLMKKLKE FEGLAMSLGN GSADNVEGGT DNGHSQSGET EGSTDGSNTN 180 GVGVSERSKK RSCETTPDNS GDDKSHSRRC QPSGEVSNDA EKAIVAVSPG KVAEKVTGTV 240 LSPSMTTLEM RNPASAHMKA SPTNGSPLSP ALPNEAWLQN ERELKREKRK QSNRESARRS 300 RLRKQAEAEE LAVRVQSLTA ENMTLKSEIN KLIENSEKLK LDNAALMERL KNEQLGQTEE 360 VSLGRIDDKR LQPVGTVNLL ARVNNSGSSD RTNEEGEVYE NNSSGAKLHQ LLDTNPRTDA 420 VAAG

Sequence ? help Back to Top

Protein Sequence Length: 424 aa Download sequence

MGNSEDGKSC KLEKPSSPTP DQSNLHVYPD WAAMQAYYGP RVAVPAYFNS AVAPGHTPHP  60
YMWGPQPMIP PYGTPYAALY AHGGVYAHPG VPIGSHPPPS HGMATSPAVS QAMDGASLSL  120
DASAKSSGNS ERGLMKKLKE FEGLAMSLGN GSADNVEGGT DNGHSQSGET EGSTDGSNTN  180
GVGVSERSKK RSCETTPDNS GDDKSHSRRC QPSGEVSNDA EKAIVAVSPG KVAEKVTGTV  240
LSPSMTTLEM RNPASAHMKA SPTNGSPLSP ALPNEAWLQN ERELKREKRK QSNRESARRS  300
RLRKQAEAEE LAVRVQSLTA ENMTLKSEIN KLIENSEKLK LDNAALMERL KNEQLGQTEE  360
VSLGRIDDKR LQPVGTVNLL ARVNNSGSSD RTNEEGEVYE NNSSGAKLHQ LLDTNPRTDA  420
VAAG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	298	304	RRSRLRK
2	298	305	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46270.1	1e-113	bZIP family protein