PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT39105.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 240aa    MW: 26942.9 Da    PI: 5.1838
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT39105.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.58.1e-1981131255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  y+GVr+++ +g+++AeIrd + ng   r++lg+f++ae Aa a+++a+ +++g
  PHT39105.1  81 SYRGVRRRP-WGKFAAEIRDSTRNG--VRVWLGTFDSAEAAALAYDQAAFSMRG 131
                 69*******.**********44465..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
MDSTPSSCSS HFLYPMNSDL YSSDSSLPFN VDDSEEMLLY GVLQETTSET VTSYHVVKEE  60
EVNSESEVVS QVESKPGKKK SYRGVRRRPW GKFAAEIRDS TRNGVRVWLG TFDSAEAAAL  120
AYDQAAFSMR GTSAILNFPV ETVRESLRDM KCHMDQDCSP VVALKKRHSM RKRNTTSSSK  180
KCNSNNNNKV MREVKMENVN NVVVFEDLGP DYLEQLLSTS SSSDQSSCDC DATPTYFSPW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.15e-48ERF family protein