PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT38746.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 264aa    MW: 30076.6 Da    PI: 5.528
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT38746.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2621.3e-1975124356
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                 y+G+r+++ +g+W+AeIrdp++     r++lg+f taeeAa+a+++ ++k++ge
  PHT38746.1  75 YRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDKEARKIRGE 124
                 9*******.**********954...4**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
MCGGAILADI IPRRDRRLSS TDLWSICSDD FWPNSSFSKP FSTQNVSPAK PKRTQPSAGN  60
EQIQKAKKRQ RKNLYRGIRQ RPWGKWAAEI RDPRKGVRVW LGTFNTAEEA ARAYDKEARK  120
IRGEKAKVNF PNEDDHHSYP EPPPLAAYND TTFYNNCYAF ENNEPVIEYL IANNNDQNGL  180
IKEVENMNGR VVEEEEKAET QVQKLSEELM AYESLMKFYE IPYVDGQSVA AMANPAAEAV  240
VGGGLMELWS FDDVSRQQPS YNVV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.14e-46ERF family protein