PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT34469.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

WOX

Protein Properties

Length: 191aa MW: 22200.5 Da PI: 9.8156

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT34469.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58.7	9.5e-19	3	63	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+++t++ql +L++l++k r+p+ ++ + ++++l +++ ++V++WFqN++a++++ PHT34469.1 3 RPRWSPTPQQLMILQDLYRKgLRNPTSTQVQTITTHLslygKIQCKNVFYWFQNHKARDRQ 63 89***************99***********************************996 PP
2	Wus_type_Homeobox	106.7	1.4e-34	2	64	2	64
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +r+RW+Ptp+Q++iL++ly++Glr+P++ ++q it++L+ yGki+ kNVfyWFQN+kaR+rqk PHT34469.1 2 PRPRWSPTPQQLMILQDLYRKGLRNPTSTQVQTITTHLSLYGKIQCKNVFYWFQNHKARDRQK 64 579***********************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 191 aa Download sequence
MPRPRWSPTP QQLMILQDLY RKGLRNPTST QVQTITTHLS LYGKIQCKNV FYWFQNHKAR 60 DRQKLRKEML HQKQKNPSDH HDDAPQLQFI TAPNNSIINL DYNFPPLYPH SPPILVHQAE 120 RKDTSSAQMM NNMGNVDFPK QCVTENGMIR TNVQGWVLMM TDMGPNSIPY CSNRPIETLE 180 LFPIKATGIK E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28610.1	1e-30	WOX family protein