PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu064317.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 317aa MW: 35940.4 Da PI: 6.8149

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu064317.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17	1.7e-05	155	174	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 y+Cp C k+F+r n++ H+ Oeu064317.1 155 YSCPVCFKTFNRYNNMQMHM 174 99*****************9 PP
2	zf-C2H2	15.7	4.2e-05	239	261	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +Cgk+F + + ++H +++ Oeu064317.1 239 FMCRKCGKTFAVRGDWRTHEKNC 261 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 317 aa Download sequence
MTDSSSDNFY KCFKFNTLHH LLSSNPPETP PPSPPLKEAL PLLTLCPTRY EEQEPSCSHT 60 MDLDKTKARQ DNSQTENIFL TPDDNVEDDG DVTVALHIGL PNPSAADLVS MRSSTAESTD 120 KDEEVDLSGY PINRLNKGQY WIPTPSQILI GPTQYSCPVC FKTFNRYNNM QMHMWGHGSQ 180 YRKGPESLRG IQPTGMLRLP CYCCEPGCRN NIDHPRAKPL KDFRTLQTHY KRKHGIKPFM 240 CRKCGKTFAV RGDWRTHEKN CGKLWYCICG SDFKHKRSLK DHIKAFGNGH GAYGFTGLEE 300 EEEPASEIEQ DDESMQ*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-127	C2H2 family protein