PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu060970.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | ERF | ||||||||
Protein Properties | Length: 355aa MW: 40055.5 Da PI: 4.4944 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63.5 | 4.6e-20 | 117 | 166 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++GVr+++ +g+W+AeIrdps+ + r +lg+++taeeAa +++a+ kl+g Oeu060970.1 117 KFRGVRQRP-WGKWAAEIRDPSQ---KVRLWLGTYDTAEEAAMVYDNAAIKLRG 166 89*******.**********964...6*************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 355 aa Download sequence |
MDLWPIKYSE NRQVTKKLVK PLKQQPKKIN EEQNFNGPRI VRISVTDPYA TDSSSDEEDE 60 LFRRRRVKKH VNEIEIETAS KSQANAIISS STNCKKSLQL KQKPMKVIAK ATGGVRKFRG 120 VRQRPWGKWA AEIRDPSQKV RLWLGTYDTA EEAAMVYDNA AIKLRGPDAL TNFSHPPAEE 180 KLEINVTSVS GYESVYESRN LCSPTSVLQF RNSQQSSEGR SEPVQELCIL TEPCSSVDGP 240 VSETGAGNDS VQEIEECKGD SNGVPNYLND YLPMDIPFLE DFFNFQSQEQ TLFDGYPPAF 300 ANDSGEFGMS FDDFPALDHS SEMENFEEFN DSFEDLAHPG LEVDNYFLDE MIKN* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27950.1 | 8e-60 | ERF family protein |