PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu054039.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family ERF
Protein Properties Length: 263aa    MW: 29274.8 Da    PI: 8.3142
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu054039.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.12.9e-20121171256
          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                  +++GVr+++ +g+W+AeIrdps+   + r +lg+++taeeAa  +++a+ kl+g+
  Oeu054039.1 121 KFRGVRQRP-WGKWAAEIRDPSQ---KVRLWLGTYDTAEEAAMVYDNAAIKLRGP 171
                  89*******.**********964...6*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MEAMDLWPVK YSENRHVTKK LVKLSNQKHR KTHEELNFNG PRIVRISVTD PFATDSSSDE  60
DDELFHRRRV KKYVNEIKLE PASKSHANAI SSSSNGKKSL QQKKKPMKVK EAAPANGGVR  120
KFRGVRQRPW GKWAAEIRDP SQKVRLWLGT YDTAEEAAMV YDNAAIKLRG PDALTNFSHF  180
PAEEKPEINV TSVSGYESGD ESRNLCSPTS VLESRSSQQS SEDRAEPVAN LCKPAEPCAS  240
VDGPALETGS ANEPVLEFEN YC*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
168108RRVKKYVNEIKLEPASKSHANAISSSSNGKKSLQQKKKPMK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.17e-61ERF family protein