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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu054006.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | ERF | ||||||||
Protein Properties | Length: 229aa MW: 26078.1 Da PI: 5.0353 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63.6 | 4.2e-20 | 75 | 123 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+G+r+++ +g+W+AeIrdp++ r++lg+f taeeAa+a++ a+k+++g Oeu054006.1 75 YRGIRRRP-WGKWAAEIRDPKK---GVRVWLGTFSTAEEAARAYDDAAKRIRG 123 9*******.**********954...4************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence |
MCGGAIISDE PIINKRGKLT TEELWAEFDT ISEFWGFKSS DDKDMQPINK PKKLNNGANN 60 KAEQKNSSRQ RRNMYRGIRR RPWGKWAAEI RDPKKGVRVW LGTFSTAEEA ARAYDDAAKR 120 IRGDKAKLNF SDNPPPSTPP LQPPSKRLCV NHEPTPFLDN GIQTQQQVYY PTQAVESQEF 180 ELNDEISSLE SFLGLEPAET PQFVNNTESI DSVDLWMMED FAQNNLFY* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G16770.1 | 8e-48 | ERF family protein |