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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu047564.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | C2H2 | ||||||||
Protein Properties | Length: 164aa MW: 18934.7 Da PI: 10.2394 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 15.9 | 3.8e-05 | 6 | 24 | 1 | 19 |
EEETTTTEEESSHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrH 19 ++C C+k+F+r nL+ H Oeu047564.1 6 FSCRLCSKTFNRFNNLQMH 24 89***************** PP | |||||||
2 | zf-C2H2 | 15.7 | 4.2e-05 | 90 | 112 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C +C k+F k + ++H +++ Oeu047564.1 90 FVCRKCRKTFAVKGDWRTHEKNC 112 89*****************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 164 aa Download sequence |
MGPTQFSCRL CSKTFNRFNN LQMHTWAHGS QYRKGTESLR RAQPNAMLRL PCYCCAQGCE 60 YNIDHRRARP LKDFRTLQTH YKRKHGTKPF VCRKCRKTFA VKGDWRTHEK NCGKIWYCIC 120 GSDFKHKRSL RDHIKAFGLG HGATGIQTDF GDEGKSSSEI EIN* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G57670.1 | 9e-93 | C2H2 family protein |