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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu046647.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | C2H2 | ||||||||
Protein Properties | Length: 283aa MW: 31316.5 Da PI: 8.1068 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.4 | 0.00049 | 105 | 127 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+++Fs+ L H +H Oeu046647.1 105 FQCKTCNRTFSSFQALGGHRASH 127 89**********99999998887 PP | |||||||
2 | zf-C2H2 | 10.9 | 0.0014 | 177 | 199 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F + L H+r+H Oeu046647.1 177 HECSYCGAEFMSGQALGGHMRRH 199 78********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 283 aa Download sequence |
MEGQNEFDMA PRELSHLVKG KRTKRQRPQS PISIPITTHD PSSKDHGNHH NSSSSAESTT 60 TEEEDTAKCL ILLAQGHHFS SNKDDDDQDF KFNSKKYIEA GTCVFQCKTC NRTFSSFQAL 120 GGHRASHNKP RNTTFVLSDE DQNLDNVSFR QKNSLSSSLS LQLTHPTNKS SSSRKVHECS 180 YCGAEFMSGQ ALGGHMRRHR GGPVATNTTL SLSSPTPALF DNQDSDKLSK KPRNGLSLDL 240 NLPAPEDDPS RTFAFNSKKQ QQQQKEGGLA LYTLPTFVDC HY* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G04390.1 | 7e-43 | C2H2 family protein |