PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu042476.2
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family WOX
Protein Properties Length: 295aa    MW: 32724.6 Da    PI: 5.8621
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu042476.2genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox672.5e-2197157257
                  T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
     Homeobox   2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                  r+R+t+t+ ql++Le+ F + n  ps+++++e++++l    +++e++V++WFqNrRa+ k+
  Oeu042476.2  97 RQRWTPTPVQLQILERIFDQgNGAPSKQKIKEITAELcqhgQISETNVYNWFQNRRARSKR 157
                  89*****************99**************************************97 PP
2Wus_type_Homeobox98.84.1e-3297159365
  Wus_type_Homeobox   3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 
                        r+RWtPtp Q++iLe+++++G   P+k++i++itaeL ++G+i+++NV++WFQNr+aR+++kq
        Oeu042476.2  97 RQRWTPTPVQLQILERIFDQGNGAPSKQKIKEITAELCQHGQISETNVYNWFQNRRARSKRKQ 159
                        89***********************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MMEWNKQPPQ QAAQPEEMNG NGGGNLNVNS GGMFVKVMTD EQMEVLRKQI AVYASICEQL  60
VELHKSLTSQ HDLAGARLVN LYCDPLVTSG GHKITGRQRW TPTPVQLQIL ERIFDQGNGA  120
PSKQKIKEIT AELCQHGQIS ETNVYNWFQN RRARSKRKQQ ATHTNNAESE VETEVESPNE  180
KKTKPEDFQP PHIASSRAAD DLCFQNPEAS SAMHSMDPRG SKPEPLLPPE GSSNHTGNFG  240
QMSFYGSMLA NPTYDTMKLL GNLTNAGMDN LIGKMEVPGN YNPYLQPDDY NMTS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1151159RRARSKRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35550.11e-80WOX family protein