PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu035738.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 331aa MW: 37208.5 Da PI: 6.6571

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu035738.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.3	5.8e-05	169	188	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++Cp C k+F+r n++ H+ Oeu035738.1 169 FSCPLCYKTFNRYNNMQMHM 188 89*****************9 PP
2	zf-C2H2	15.6	4.5e-05	253	275	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C +Cgk F + + ++H +++ Oeu035738.1 253 FTCRKCGKAFAVRGDWRTHEKNC 275 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 331 aa Download sequence
MTNPYPNYFN GGWFNLEYPN NHLFSSSYPY NLDYATSLNN NSLYQSSPPS PPIREALPLL 60 SLGPTKTSTD QEQGSSSCST AMEMDKIMIK DNNEESFMMD FDDESVTIDL NLGLPTPDAA 120 DLISGLSSSS STNKDQEVTV ANGYGSSPIN KGQYWIPTPA QILIGPTQFS CPLCYKTFNR 180 YNNMQMHMWG HGSQYRKGPE SLRGIQPTAM LRLPCYCCAP DCRNNIDHPR AKPLKDFRTL 240 QTHYKRKHGI KAFTCRKCGK AFAVRGDWRT HEKNCGKLWY CTCGSDFKHK RSLKDHIKAF 300 GNGHAAYGFD SFEEEDEPAS EIEQDNESSQ *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-131	C2H2 family protein