PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu033173.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 321aa MW: 36508.3 Da PI: 7.8958

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu033173.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.3	2.7e-05	159	178	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++Cp C k+F+r n++ H+ Oeu033173.1 159 FSCPVCFKTFNRYNNMQMHM 178 89*****************9 PP
2	zf-C2H2	13.5	0.00021	243	265	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +C+k F + + ++H +++ Oeu033173.1 243 FMCRKCDKAFAVRGDWRTHEKNC 265 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 321 aa Download sequence
MTGNPCSKFY TDWYKFNPSH HFSTKSPHHL MTPYIHDNSL HSTQTPPPSP VREALPLLSS 60 SPITTRNNEE KQEPSWILDM DIYKIKGTED RVTADNEDVT VALHIGLPNP SAADLASILS 120 ETSAKDEEAD VSRYPINRLN KGQYWIPTPS QILIGPTQFS CPVCFKTFNR YNNMQMHMWG 180 HGSQYRKGPE SLRGTQPTGM LKLPCYCCAP GCKNHIDHPR AKPLKDFRTL QTHYKRKHGI 240 KPFMCRKCDK AFAVRGDWRT HEKNCGKLWY CICGSDFKHK RSLKDHIKAF GLGHGAFGID 300 GVEEEDEPAS EIEQDDEYIQ *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-140	C2H2 family protein