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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu024548.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | ERF | ||||||||
Protein Properties | Length: 328aa MW: 36000.1 Da PI: 6.6327 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65.6 | 1e-20 | 153 | 202 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr+++ +g+WvAeIr p++ r+r +lg+f+taeeAa a+++a+ kl+g Oeu024548.2 153 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEEAALAYDKAAYKLRG 202 59******9.**********965...5*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 328 aa Download sequence |
MAVAMDFWSS SASVVDPFRG GELMEALEPF MKSASSTSLS PPSNLPSSSS SFSSSPSTSS 60 SYPFNSCYYP VESNFQPNLN LDSGNFVYQQ PCSIGLNHLT QAQIQEIQAR INLQNQQQMV 120 SGPFNTQAHN MNFLGPKPVP MKQVGSPPKP TKLYRGVRQR HWGKWVAEIR LPKNRTRLWL 180 GTFDTAEEAA LAYDKAAYKL RGDFARLNFP HLRHNGSHIG GEFGEYKPLH ASVDAKLQSI 240 CQNLAEGKSI DSKKSKGRSK KSSPAVEAPA EESSTKNVVE PASESDGSGG SSPVSDLTFL 300 EFTEEDSPWD MNSLEKYPSY EIDWSAL* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G78080.1 | 5e-67 | ERF family protein |