PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu024465.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family ERF
Protein Properties Length: 382aa    MW: 42799.4 Da    PI: 4.5511
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu024465.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.64.1e-20130179255
          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                  +++GVr+++ +g+W+AeIrdp     +   r +lg+++taeeAa  +++a+ kl+g
  Oeu024465.1 130 KFRGVRQRP-WGKWAAEIRDP-----CrkVRLWLGTYDTAEEAAMVYDNAAIKLRG 179
                  89*******.**********8.....336*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 382 aa     Download sequence    
MDQSMLWPVK YTEHSELIQK LVKSSNQKPG KPSKSQQKQS LNFPRTVRIS VTDPDATDSS  60
SDDEDELFRG QRVKKYINEI RIEAAVKTNN VNAINVNERC KKRNGGVLQA KPKAMKVKEV  120
AQPAANGVRK FRGVRQRPWG KWAAEIRDPC RKVRLWLGTY DTAEEAAMVY DNAAIKLRGP  180
DALTNFVTPP PKDKPETNDT SVSGYESGVE SRNLSSPTSV LRYRTSQSSE NDTDQQSVSE  240
PVQEVGKDVE PSASVGRPDQ NQRVNGTGST YGPIQEVQEY QGETSMVPDY TKDYLPMDIP  300
FLDDFFNFQP QEQTLFNDTQ DLAKDFSMSI DEIPGFMDFS QGSDFVDFNS NHSLQDLSSI  360
EVDDYFVDMG DFASVDALLE I*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.14e-51ERF family protein