PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Oeu024465.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 382aa MW: 42799.4 Da PI: 4.5511 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63.6 | 4.1e-20 | 130 | 179 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 +++GVr+++ +g+W+AeIrdp + r +lg+++taeeAa +++a+ kl+g Oeu024465.1 130 KFRGVRQRP-WGKWAAEIRDP-----CrkVRLWLGTYDTAEEAAMVYDNAAIKLRG 179 89*******.**********8.....336*************************99 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 382 aa Download sequence |
MDQSMLWPVK YTEHSELIQK LVKSSNQKPG KPSKSQQKQS LNFPRTVRIS VTDPDATDSS 60 SDDEDELFRG QRVKKYINEI RIEAAVKTNN VNAINVNERC KKRNGGVLQA KPKAMKVKEV 120 AQPAANGVRK FRGVRQRPWG KWAAEIRDPC RKVRLWLGTY DTAEEAAMVY DNAAIKLRGP 180 DALTNFVTPP PKDKPETNDT SVSGYESGVE SRNLSSPTSV LRYRTSQSSE NDTDQQSVSE 240 PVQEVGKDVE PSASVGRPDQ NQRVNGTGST YGPIQEVQEY QGETSMVPDY TKDYLPMDIP 300 FLDDFFNFQP QEQTLFNDTQ DLAKDFSMSI DEIPGFMDFS QGSDFVDFNS NHSLQDLSSI 360 EVDDYFVDMG DFASVDALLE I* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G27950.1 | 4e-51 | ERF family protein |