PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Oeu017670.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 224aa MW: 24650.2 Da PI: 10.0016 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.6 | 7.6e-19 | 69 | 117 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+G+r+++ +g+W+AeIrdp++ r++lg+f tae+Aa+a+++ ++k++g Oeu017670.1 69 YRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEDAARAYDKEARKIRG 117 9*******.**********954...4*************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 224 aa Download sequence |
MCGGTVLGYI IPRNGNRGVT STDFWPDSSS SSSSSGQNVT TSFKTSQPHK DGEHDVKGAK 60 GKRQRKNLYR GIRQRPWGKW AAEIRDPRKG VRVWLGTFNT AEDAARAYDK EARKIRGKKA 120 KVNFPNEDDD YHYNRFNSNP YNDKLHNGNS GDFNRVDPYN NGVYSMLKAN PVVEHPSKEV 180 SVTGNGLNSG LEAMTGNING GKETVIKVAD EATTVAVAEN ELR* |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 60 | 65 | KGKRQR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G47520.1 | 1e-36 | ERF family protein |