PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu017604.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 542aa MW: 60507.6 Da PI: 6.6811

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu017604.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.7	4.2e-13	357	401	5	54
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h + ErrRR+++N++f+ Lr+ lP+ K +Ka++L +veY++sL Oeu017604.1 357 HMISERRRREKLNESFQILRSFLPPG-----SKKDKASVLNNTVEYLSSL 401 8899******************95.....599************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 542 aa Download sequence
MDSIFQQSEG ERAAFLQHMM QSFGCSYICL WSFLPQPDKC LIYLDGAYHE RSSQASSSSG 60 SSLVRRLFDA YCQSPYYVDN GRVPGIAFKN NLPYMELNLQ DLLGMVSNEV QMQFYVAAGI 120 KNVVFMGCAK GEIELGMSGD ARVGLEMEVK NWFPLDFSRQ LEPREDPQKT DQKRGSSSSS 180 SLRSLSVDSS EYSSLLFNIP AASFILPEAS KAPLVENTTA LGLLTVPSSS ITTSPLHEAI 240 HSLTQMRSNQ LPTVENEDAA ITKAILAVLS SDTSSTPLYQ TTQNIPHIPP IIIHNPSAFS 300 SYRQGISSTL IPIAARTSKK QNLLRRAMLF FRNLDIIRRQ QEQVQVGKHP SMTQLHHMIS 360 ERRRREKLNE SFQILRSFLP PGSKKDKASV LNNTVEYLSS LKKQVEELGK KNQILEAQIL 420 PPRSEAIGDD PNQMRGSSSV ERLTNVQITR VSTSTSESRM LDVNVTINGE CSLLDLVIRI 480 TEFLKSQNNL SLMTIEGNTR PMGESTNSVH GIMFRLRNEG EDFDESSFQE AVKRLVDDET 540 R*

Sequence ? help Back to Top

Protein Sequence Length: 542 aa Download sequence

MDSIFQQSEG ERAAFLQHMM QSFGCSYICL WSFLPQPDKC LIYLDGAYHE RSSQASSSSG  60
SSLVRRLFDA YCQSPYYVDN GRVPGIAFKN NLPYMELNLQ DLLGMVSNEV QMQFYVAAGI  120
KNVVFMGCAK GEIELGMSGD ARVGLEMEVK NWFPLDFSRQ LEPREDPQKT DQKRGSSSSS  180
SLRSLSVDSS EYSSLLFNIP AASFILPEAS KAPLVENTTA LGLLTVPSSS ITTSPLHEAI  240
HSLTQMRSNQ LPTVENEDAA ITKAILAVLS SDTSSTPLYQ TTQNIPHIPP IIIHNPSAFS  300
SYRQGISSTL IPIAARTSKK QNLLRRAMLF FRNLDIIRRQ QEQVQVGKHP SMTQLHHMIS  360
ERRRREKLNE SFQILRSFLP PGSKKDKASV LNNTVEYLSS LKKQVEELGK KNQILEAQIL  420
PPRSEAIGDD PNQMRGSSSV ERLTNVQITR VSTSTSESRM LDVNVTINGE CSLLDLVIRI  480
TEFLKSQNNL SLMTIEGNTR PMGESTNSVH GIMFRLRNEG EDFDESSFQE AVKRLVDDET  540
R*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	361	366	ERRRRE
2	362	367	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56960.1	2e-57	bHLH family protein