PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu016300.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 305aa MW: 33589.2 Da PI: 7.6485

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu016300.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.3	0.001	126	148	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+++F++ L H +H Oeu016300.1 126 YECKTCSRTFPSFQALGGHRASH 148 99**********99999998887 PP
2	zf-C2H2	14.2	0.00013	202	224	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F++ L H+r+H Oeu016300.1 202 HECSYCGAEFTSGQALGGHMRRH 224 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 305 aa Download sequence
MEAPADVAAG PCNDLTHIVK GVRTKRQRPH SPIPSIIRSG GDGHCDTILH HSNPGSDLSP 60 DPESINITSE DEETAKCLIL LAQGHRSPPK YKIDHDHDQD QDYKFNSKRY IETSSTSGNK 120 AGIFVYECKT CSRTFPSFQA LGGHRASHKK PKNNAKRAFF YSDSEDDFSF TLHDNGTKMS 180 PLPSLQPVNK KKNSSFHSFK VHECSYCGAE FTSGQALGGH MRRHRGGGPP IAAANTTLSL 240 STPISQASFD YYNQESEESK KTTRNSLSLD LNLPAPEDEH KQQKQQKGAE FDFSTPPALV 300 NCHY*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04390.1	9e-48	C2H2 family protein