PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Oeu014381.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
|
||||||||
Family | WOX | ||||||||
Protein Properties | Length: 223aa MW: 25394.6 Da PI: 9.5197 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 66.9 | 2.8e-21 | 15 | 74 | 3 | 57 |
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++tkeq++ Le l+ k r+psae+++++++kl +++ ++V++WFqN++a++++ Oeu014381.1 15 SRWNPTKEQINMLEGLYMKgLRTPSAEQIQQITEKLrvygHIEGKNVFYWFQNHKARQRQ 74 7*****************99**************************************97 PP | |||||||
2 | Wus_type_Homeobox | 113.4 | 1.2e-36 | 14 | 76 | 3 | 65 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +RW+Pt+eQi++Le ly +GlrtP++e+iq+it++L+ yG+ie+kNVfyWFQN+kaR+rqkq Oeu014381.1 14 GSRWNPTKEQINMLEGLYMKGLRTPSAEQIQQITEKLRVYGHIEGKNVFYWFQNHKARQRQKQ 76 68***********************************************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 223 aa Download sequence |
MEGENLCSNS PSSGSRWNPT KEQINMLEGL YMKGLRTPSA EQIQQITEKL RVYGHIEGKN 60 VFYWFQNHKA RQRQKQKQEN IAYLNRFLHT TPVIPTYQNV VRSPYYVQPP QSDLGFNSQY 120 SKVPVPLPGG FNTRIIPENI GKNKDKVIHP RSRNEEFDVI SNKKWSNQET LDLFPVHPTG 180 ILQAKTRSPN SAENSTPSSP IPSENNCIFG HPFFEFFCGN GP* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G59340.1 | 3e-47 | WOX family protein |