PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Oeu009421.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 168aa MW: 18621.8 Da PI: 6.5526 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 51.3 | 2.9e-16 | 43 | 94 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 +y+GVr ++ +g+++AeIrd + ng r++lg+f +aeeA +++a+ +++g+ Oeu009421.1 43 RYTGVRKRP-WGKYAAEIRDSTRNG--IRVWLGTFNSAEEAGLVYDQAAFAMRGA 94 79*******.**********44465..*************************995 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 168 aa Download sequence |
MDSSCGKNAL KVEEESPSFD IDATEEGIQE FLWNLAEANK EKRYTGVRKR PWGKYAAEIR 60 DSTRNGIRVW LGTFNSAEEA GLVYDQAAFA MRGASAHLNF PSEKVKKSLK NMNYKYEDGS 120 SPAEAIKEIH RARSSSNGKG KKKQISKDVL VLEDLGSDLL DELLSQS* |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 138 | 144 | GKGKKKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G23240.1 | 3e-44 | ERF family protein |