PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu008343.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | ERF | ||||||||
Protein Properties | Length: 258aa MW: 28225.2 Da PI: 8.609 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.3 | 1.8e-18 | 81 | 129 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+G+r+++ +g+W+AeIrdp++ r++lg+f taeeAa+a+++ ++ ++g Oeu008343.1 81 YRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDREARIIRG 129 9*******.**********954...4*******************99988887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence |
MCGGAILAGF IPRSKGSSQL SAADLWPTSA DFWPISHFAK PNNSSSSSQN GSKPLKRSQS 60 CTGDKQAEIG GNAKRQRKNL YRGIRQRPWG KWAAEIRDPR KGVRVWLGTF NTAEEAARAY 120 DREARIIRGK KAKVNFPNED DAYNPYNHNH NHNHNLTYNN NHGSFKTYPL EEVSGSASGW 180 VLDAAAVAAE EAAKDNEVQK LSEELMAYEN YMKFYQIPYL DGQSVAAAAG SNPAQETVLG 240 GGALDLWSFD DVTPAVT* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47520.1 | 6e-37 | ERF family protein |