PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu007844.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | ERF | ||||||||
Protein Properties | Length: 323aa MW: 36104.7 Da PI: 4.7632 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.8 | 7.3e-20 | 104 | 154 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ++++GVr+++ +g+W+AeIrdp r +r++lg+++taeeAa +++a+ +++g Oeu007844.1 104 KKFRGVRQRP-WGKWAAEIRDPE----RkTRVWLGTYDTAEEAAMVYDRAAIQIRG 154 59********.**********62....34***********************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 323 aa Download sequence |
MNPTIKKTIT TKIIESPSLI NKLSSRVVRI SVMDCDATDS SSDEKEGLDT NMNIQRVKKH 60 VNEIRMERKC VQAKKSVNGK TKNVKKKRAP PPPAPVAGVE GNGKKFRGVR QRPWGKWAAE 120 IRDPERKTRV WLGTYDTAEE AAMVYDRAAI QIRGPDAITN FIKPPERVVV LALEANVTSV 180 SGYDSCKDES CENLSSPTSV LNSNGGIVRS ELKKTDERQK IFIEDRKLVG STVMVQNEVD 240 LLMDDSLPLD QCFLTEYFDF QSPSPLVFDE INVAKTELDE DPNDVSIDLD ADFRSPTWDV 300 NDFFEDQFFG ELENSFGAAF DA* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27950.1 | 2e-51 | ERF family protein |